BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E11SP1|AL429420
(947 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig992 1751 0.0
>3x_Contig992
Length = 4146
Score = 1751 bits (874), Expect = 0.0
Identities = 927/949 (97%), Gaps = 4/949 (0%)
Strand = Plus / Minus
Query: 1 gtctttttggtaatawacaatgccacatcaggtaacactggaggmgggttatttggaaac 60
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1458 gtctttttggtaata-acaatgccacatcaggtaacactggaggagggttatttggaaac 1400
Query: 61 aataacaatacagcgacacagactggcg-gaggattatttggcagtcatccagcaggcac 119
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 1399 aataacaatacagcgacacagactggcgcgaggattatttggcagtaatccagcaggcac 1340
Query: 120 caacaacaatacgaaccaaaccgcagaggacttttcggaagtyctaataatacagcc-ac 178
||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 1339 caacaacaatacgaaccaaaccgcagaggacttttcgga-gttctaataatacagcccac 1281
Query: 179 tggctccacaggtggcctatttggtaactcaggagccgggtctggcggaggcttattcgg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 tggctccacaggtggcctatttggtaactcaggagccgggtctggcggaggcttattcgg 1221
Query: 239 gaatmagtcagcmcaaccacagaccactggttttggaagcyctggaactggaggaggatt 298
|||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1220 gaataagtcagcacaaccacagaccactggttttggaagctctggaactggaggaggatt 1161
Query: 299 atttggmtccaaaccagcmcaaccacagactaccggtttcggaggctctgcmactggtgg 358
|||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1160 atttggatccaaaccagcacaaccacagactaccggtttcggaggctctgcaactggtgg 1101
Query: 359 aggattgtttggatccaaaccaactaccggaggcccattcggaaatcaacaacagcmatc 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1100 aggattgtttggatccaaaccaactaccggaggcccattcggaaatcaacaacagcaatc 1041
Query: 419 ccaacaatctggtttaggaatgtttggacaaacacaaaatcaatttcaacagccaccaca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 ccaacaatctggtttaggaatgtttggacaaacacaaaatcaatttcaacagccaccaca 981
Query: 479 acaacagatacaacagactcaacagagtgccattaatttcattaaccaattagctatcac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 acaacagatacaacagactcaacagagtgccattaatttcattaaccaattagctatcac 921
Query: 539 gccgatgaccaagatatcggagcttccgattcamattcgtcaagaaatcgaacaattgga 598
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 920 gccgatgaccaagatatcggagcttccgattcaaattcgtcaagaaatcgaacaattgga 861
Query: 599 ccmattcattagaacgcmagttnctttatccaaacatcttgaagctgatctacaagatca 658
|| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 860 ccaattcattagaacgcaagtgtctttatccaaacatcttgaagctgatctacaagatca 801
Query: 659 aactgaactattggattcaatccctcgtgacaycaagtatctacaaaaattgcatttcaa 718
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 800 aactgaactattggattcaatccctcgtgacatcaagtatctacaaaaattgcatttcaa 741
Query: 719 cgcaacaagatcactatcatcagatttgaaacgaatcgatgccatcaagacactagtgga 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cgcaacaagatcactatcatcagatttgaaacgaatcgatgccatcaagacactagtgga 681
Query: 779 taaagatgttaaacaattggaaaattttgctataatgttgcaacaactagtcagttaggg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 680 taaagatgttaaacaattggaaaattttgctataatgttgcaacaactagtcagtaaggg 621
Query: 839 attcaaaatatcaaacgttgagatagataagttcttccaggaaaaattaatcacatacaa 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attcaaaatatcaaacgttgagatagataagttcttccaggaaaaattaatcacatacaa 561
Query: 899 acacaaattaaatgactacaacgacactctaagcmatattgacgacgca 947
|||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 560 acacaaattaaatgactacaacgacactctaagcaatattgacgacgca 512
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6367
Number of Sequences: 1807
Number of extensions: 6367
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)